DepMap Documentation

Datasets
Gene Mapping & Cancer Driver Annotation Mutation Copy Number Expression Methylation CRISPR: Dependencies Drug Sensitivity Fusions Proteomics Model Authentication for Datasets
Models
Model Annotation & Glossary of Terms Model Relationships MSI, Ploidy & Mutational Burden Growth Rate
API
Endpoints Modifiers
Sanger DepMap Websites Data Usage Policy FAQ

Methylation

This page outlines raw data and the subsequent processing for use within the Cancer Dependency Map at Sanger.

Raw Data

Dataset Origin Data Type Model Type Details Link
Methylation Sanger IDAT Cell Line Illumina Human Methylation 450 BeadChip GSE68379

Processed Data

Processed data is not currently available within DepMap.

This data was included in Iorio et al. A Landscape of Pharmacogenomic Interactions in Cancer. Cell, 2016. and can be found here.

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